PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006099.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 206aa    MW: 22707.8 Da    PI: 4.7936
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006099.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.60.0002562961754
                 HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +++f eL ++l +    + +K +K++iL  A++ + +L
  PCP006099.1 62 RKRFVELSSILEPE---RPPKTDKVAILGDAIRMVTQL 96
                 67999********9...99**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MGSPPQNPNW VFDYGVIDDI LPSLDPPGFS WPDHSFAGPT APGVEFDDSF GNPDSMKETG  60
LRKRFVELSS ILEPERPPKT DKVAILGDAI RMVTQLRGEA QQLKESSANL QETVNELKAE  120
KNELRDEKQR LKAEKENIER QMKALGTQPS FLPHPAAIPT PFSAPGQVVG GKMMPFVGYP  180
GMSMWQFMPP AAVDTSQDHV LRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-74bHLH family protein