PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006165.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 408aa    MW: 45318.9 Da    PI: 9.3721
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006165.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12233285155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++++h e+E++RR+++ + +  Lr++lP  +   ++K s a+   +Av+YIk+Lq
  PCP006165.1 233 KKVMHREIEKKRRQEMGNLYGSLRSVLPLEF--IKGKRSLADHMNEAVNYIKQLQ 285
                  6899*************************65..*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MWPGYSPSRD VHLPHFTLTL DLRVIVMRVI FWEVIQVPAA EFRIDEDSWH FSVHMSSYDG  60
VSLHSSIRSP SGHSGSRPRH RIYRSVLSKK LPRTRYFNFL MISSLLFVWV SFPKSVTCDG  120
DGEGAEPDHL FPSTIRAGPF VSGIEANPHH LAVLVQGALT VLCDVKILHK RYAILFEPCN  180
GHISSEHELE NRIRAGPPES HVIHGGQRRK SSLALTSDGA KNQDKSNDDD EKKKVMHREI  240
EKKRRQEMGN LYGSLRSVLP LEFIKGKRSL ADHMNEAVNY IKQLQTRIKI FGAKRGELKM  300
GTALSNLSAS TLGHGSSGSS STAASTLVAV HPCLAGVEIV VSTGRSPEQG FLLSRMLKIL  360
LGQGLNVISC STTQVNRRLV YTIQSEVSDP TCIDFSGLQQ ILTEACHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.16e-44bHLH family protein