PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006166.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 699aa MW: 77821.2 Da PI: 7.9876

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006166.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26	1.7e-08	91	138	6	55
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++ + + Lr+llP + ++K s e +Av+YI++L+ PCP006166.1 91 RDNERQRRQHMATLHASLRSLLPYeL---IKGKRSITEHMNEAVNYINHLK 138 679*******************88...******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MFPNSYHRGQ SKDLVFQTST INFPHREDMM HVQDLMRGHE VFPEGKNPSR NKMMGKGKQQ 60 QQQHRMILSP NSNNNGANPS DGKTERKIVR RDNERQRRQH MATLHASLRS LLPYELIKGK 120 RSITEHMNEA VNYINHLKAK IEELNAKKEK INKKLYECDS QDFGLRNESS GHNFLKYSIM 180 VRPTCLGGVE VLVSSSCGEE EGLLLSGVLK VLLAEGLSVV ECASTRVNES LFHTIQCEVV 240 NDLACLDLSE LQLKLNNYYN SGDDDNGGKG NVVMMVVVVP INECGDWVTE VTMVIGNDDG 300 GGCGCVYVCV CGGGDGNGSN DGSNSCGCGG SGDEYGCSGG GAIVVSRWRK QWWWLVLSFQ 360 EPKCPGTAFV ALPKKIKNLL RPGFTRIGIT RGKYILSRSF FMQQTASTMI TKLEKEGLEV 420 FIGVEQVKIA VKRLKTMSPK AEMEFAVEVE ILGRVRHRNL LGLRGFYAGG DERLIVYDFM 480 PNHSLITHLH GKLAADCLLD FPRRLSIAIG SAEGLSYLHH EASPHIIHRD IKASNVLLDT 540 EFEAKVADFG FAKLIPDGVT HLTTRVKGTI GYLAPEYAMW GKVSESCDVY SFGILLLEII 600 SGKKPIEKLP GGVKRDIVQW VTPYVQKGAF NQIVDPRLKG KFDKEQVKST VLVAMKCTDN 660 SPDNRPTMIE VVDWLKGGIG RRKKEFRKVE DTEDDQDEG

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MFPNSYHRGQ SKDLVFQTST INFPHREDMM HVQDLMRGHE VFPEGKNPSR NKMMGKGKQQ  60
QQQHRMILSP NSNNNGANPS DGKTERKIVR RDNERQRRQH MATLHASLRS LLPYELIKGK  120
RSITEHMNEA VNYINHLKAK IEELNAKKEK INKKLYECDS QDFGLRNESS GHNFLKYSIM  180
VRPTCLGGVE VLVSSSCGEE EGLLLSGVLK VLLAEGLSVV ECASTRVNES LFHTIQCEVV  240
NDLACLDLSE LQLKLNNYYN SGDDDNGGKG NVVMMVVVVP INECGDWVTE VTMVIGNDDG  300
GGCGCVYVCV CGGGDGNGSN DGSNSCGCGG SGDEYGCSGG GAIVVSRWRK QWWWLVLSFQ  360
EPKCPGTAFV ALPKKIKNLL RPGFTRIGIT RGKYILSRSF FMQQTASTMI TKLEKEGLEV  420
FIGVEQVKIA VKRLKTMSPK AEMEFAVEVE ILGRVRHRNL LGLRGFYAGG DERLIVYDFM  480
PNHSLITHLH GKLAADCLLD FPRRLSIAIG SAEGLSYLHH EASPHIIHRD IKASNVLLDT  540
EFEAKVADFG FAKLIPDGVT HLTTRVKGTI GYLAPEYAMW GKVSESCDVY SFGILLLEII  600
SGKKPIEKLP GGVKRDIVQW VTPYVQKGAF NQIVDPRLKG KFDKEQVKST VLVAMKCTDN  660
SPDNRPTMIE VVDWLKGGIG RRKKEFRKVE DTEDDQDEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	4e-23	bHLH family protein