PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006644.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 167aa MW: 19185.6 Da PI: 9.0763

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006644.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	110	144	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+ +gL+++q+ +WF N+R ++ PCP006644.1 110 KWPYPTEADKISLAQVTGLDQKQINNWFINQRKRH 144 669*****************************985 PP
2	ELK	38.5	2.4e-13	64	85	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ LlrKYsgy+++Lk+EFs PCP006644.1 64 ELKDKLLRKYSGYISTLKHEFS 85 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MAFLDYGVPS LCSHGRDSVS TLKSKPNKLR GNCQDDAAGS SGEEEGSGGE IEAQDSPRTK 60 EDHELKDKLL RKYSGYISTL KHEFSKTKKK GKLPKEARQI LFDWWNLHYK WPYPTEADKI 120 SLAQVTGLDQ KQINNWFINQ RKRHWKPSEN MQFAVMDSLY GPCFTKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-52	TALE family protein