PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006658.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 228aa MW: 26068.2 Da PI: 7.6181

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006658.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50	6.9e-16	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l d+++++G+g W+++ + g++R++k+c++rw +yl PCP006658.1 10 KGLWTVEEDRILMDYIREHGKGKWNRVNKVTGLRRCGKSCRLRWMNYL 57 678*******************************************97 PP
2	Myb_DNA-binding	60.1	4.9e-19	63	108	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eEd+l+++++++lG++ W++Ia +++ gRt++q+k++w+++l PCP006658.1 63 RGDFSEEEDDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 108 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MESGGNEYKK GLWTVEEDRI LMDYIREHGK GKWNRVNKVT GLRRCGKSCR LRWMNYLSPN 60 VKRGDFSEEE DDLIIRLHNL LGNRWSLIAG RVPGRTDNQV KNHWNTHLSK KLGVSSKKGR 120 TKVKTYPDTE RAKKNSFTPS SNSNSELQPL PNSDSNSNIF GDDEVAAVIN GFDDEIINVK 180 DNNIGFKSGV GFNDMWEAMM ISNDLNLYGS YLLDPTLDDH YAFQFDNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	6e-65	MYB family protein