PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006699.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 99aa    MW: 10891.2 Da    PI: 7.6842
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006699.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.56.5e-332682360
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                 +vrY eC+kNhAa+lGg+avDGC+Efm+s geegt++al+CaACgCHRnFHRreve+e
  PCP006699.1 26 TVRYCECQKNHAANLGGYAVDGCREFMAS-GEEGTTEALTCAACGCHRNFHRREVETE 82
                 79**************************9.999*********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MKKRQVVVKR DGSGRSSSTS SSMVRTVRYC ECQKNHAANL GGYAVDGCRE FMASGEEGTT  60
EALTCAACGC HRNFHRREVE TEVVCEYSPP NSYGELCTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.16e-40ZF-HD family protein