PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006712.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 93aa    MW: 10595.9 Da    PI: 6.513
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006712.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.3e-0919591454
                 HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 d+i++ +++L+ llP++ ++++  +s ++iLe+++ YIk L
  PCP006712.1 19 DEIKELISKLQPLLPQLHHTRNAPVSASSILEETCSYIKRL 59
                 689*************88*********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MSSRRSSSSS SRTSKPSDDE IKELISKLQP LLPQLHHTRN APVSASSILE ETCSYIKRLH  60
REVEDLSQRI SQLLDSADIS DVDEELIRRL LQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.15e-23bHLH family protein