PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006736.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 251aa    MW: 28454.9 Da    PI: 6.3126
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006736.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91e-17106155355
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +l+g
  PCP006736.1 106 YRGVRRRP-WGKYAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFALRG 155
                  9*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEMESAFFHF SSPEFSSDSS FGSQHSFSWG DESLLLPFNS HELMNFPPFN INDSQDMLLY  60
DVVARGAKQT LVAQNEANSF NGVKEQEVTS ANNQTLEEKF TKEKAYRGVR RRPWGKYAAE  120
IRDSTRHGIR VWLGTFDSAE AAALAYDQAA FALRGSLAVL NFPAQVVQES LQEIKYRHDE  180
ACSPVIALKR RHSMKRKSMH KKGNKPSQCT DQRKVQEVLP QNVMVLEDLG VEYLEELLDI  240
SSCGSNHWSP Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-56ERF family protein