PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP006777.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 258aa    MW: 28113 Da    PI: 6.7893
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP006777.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.0002497119123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C++ F ++  L  H++ H
  PCP006777.1  97 FSCNYCKRKFYSSQALGGHQNAH 119
                  89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MLTQNLNLEF ENNSEVTNQV TSNVPLQEES PDASKDSATT SSCLTNQTNH QQQDPGPVSL  60
DLTLQFCSSD VELKGTGETS SEAAAPPTSE GTNPRVFSCN YCKRKFYSSQ ALGGHQNAHK  120
RERTMAKRAM RMGMFTDRYT SLASLPLHGS AASAFRSLGI QAHSAVHQNT MVSSDHPRFP  180
VPDTRGVARF QHGYFGVPVF MDEDDEGMFW PGSFRQVGKG VGGHYNVQSA QNPNMNSGTS  240
MAPRNNTSSS SPDLTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.15e-47C2H2 family protein