PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP006793.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ARR-B

Protein Properties

Length: 670aa MW: 72712.8 Da PI: 6.0386

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP006793.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.7	5.3e-28	232	285	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G +kA+Pk+ile+m+v+gLt+e+v+SHLQk+Rl PCP006793.1 232 KPRVVWSVELHQQFVTAVNQL-GLDKAVPKRILEMMNVPGLTRENVASHLQKFRL 285 79*****************.******************************8 PP
2	Myb_DNA-binding	40.6	5.8e-13	234	284	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I ++m+ g+t++++ s++qk++ PCP006793.1 234 RVVWSVELHQQFVTAVNQLGLDkaVPKRILEMMNvPGLTRENVASHLQKFR 284 678**********************************************97 PP
3	Response_reg	72.7	1.4e-24	48	156	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+ + +++l+ +l + y +v+ +++++ al+ll+e++ +D++l D+ mp+mdG++ll++i e +lp+i+++a g + + + ++ Ga PCP006793.1 48 VLVVDDDTTCLRILELMLLRCLY-QVTICSEATVALNLLRERKdcFDVVLSDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADGRTSVVMRGIRHGAC 142 89*******************.***********99999*******************6654.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 dfl Kp+ ++el + PCP006793.1 143 DFLIKPVREAELKN 156 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MAALQRVAQS SVSTTASSYG SCKGGGGVLS PSAAEMAVPD RFPAGLRVLV VDDDTTCLRI 60 LELMLLRCLY QVTICSEATV ALNLLRERKD CFDVVLSDVH MPDMDGFKLL EHIGLEMDLP 120 VIMMSADGRT SVVMRGIRHG ACDFLIKPVR EAELKNIWQH VVRKKWNGSK ELEHSGSLED 180 NDPHKRGNND IEYTSSVNEG TEVSLKGQKK RINAKEDDDG DTENDDMSTS KKPRVVWSVE 240 LHQQFVTAVN QLGLDKAVPK RILEMMNVPG LTRENVASHL QKFRLYLKRL NGVAQQQSGI 300 ANAFCGPADS NGKLGSLSRF DFPALAASGQ IPPQTLAALQ AELLGQPAGN LMPATDQPAL 360 LHASLQGAKR PPVEHGVPFV QPFIKSQSNV SKQFPQPVIS AEDVSPGFGQ WRSNNRSTVA 420 PSNYHGGSSA LNSNLLMGVV QQEQRQHDRT QQQSALIEPC RSFNVQPSCL VVPSQSSTGF 480 QAGNSPASFN QSISFNKSTV IDYSLLSDQS NNSLNIGHIP TGNLKITGTL GGYSAPGSIS 540 PTSCIVNADN NSTSYQNSTA TFSDSRELPG VLHNTSNSQG FYVDKSGEML DQGPLRNLGF 600 VGKETCIPSR FAVDDFESQM SNLNPGRIQV ENSGALVKQE PIVDYVDNEK LGIPILQQYS 660 SSDFMSPFTD

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MAALQRVAQS SVSTTASSYG SCKGGGGVLS PSAAEMAVPD RFPAGLRVLV VDDDTTCLRI  60
LELMLLRCLY QVTICSEATV ALNLLRERKD CFDVVLSDVH MPDMDGFKLL EHIGLEMDLP  120
VIMMSADGRT SVVMRGIRHG ACDFLIKPVR EAELKNIWQH VVRKKWNGSK ELEHSGSLED  180
NDPHKRGNND IEYTSSVNEG TEVSLKGQKK RINAKEDDDG DTENDDMSTS KKPRVVWSVE  240
LHQQFVTAVN QLGLDKAVPK RILEMMNVPG LTRENVASHL QKFRLYLKRL NGVAQQQSGI  300
ANAFCGPADS NGKLGSLSRF DFPALAASGQ IPPQTLAALQ AELLGQPAGN LMPATDQPAL  360
LHASLQGAKR PPVEHGVPFV QPFIKSQSNV SKQFPQPVIS AEDVSPGFGQ WRSNNRSTVA  420
PSNYHGGSSA LNSNLLMGVV QQEQRQHDRT QQQSALIEPC RSFNVQPSCL VVPSQSSTGF  480
QAGNSPASFN QSISFNKSTV IDYSLLSDQS NNSLNIGHIP TGNLKITGTL GGYSAPGSIS  540
PTSCIVNADN NSTSYQNSTA TFSDSRELPG VLHNTSNSQG FYVDKSGEML DQGPLRNLGF  600
VGKETCIPSR FAVDDFESQM SNLNPGRIQV ENSGALVKQE PIVDYVDNEK LGIPILQQYS  660
SSDFMSPFTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-111	ARR-B family protein