PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007068.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 248aa    MW: 28171.5 Da    PI: 8.4185
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007068.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.66.2e-051341731155
                  HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  rR +++ +++  L++l+ +      +K + a++L++A  YI  Lq
  PCP007068.1 134 RRSQKLSDKITALQKLVSPY-----GKTDTASVLQEASIYIMLLQ 173
                  7999**************99.....9***************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MGSKAFESDN QNNMSAGDFS LPLQQSSSLI TYQSAVNYPS GAFRYDDIAG QSMLLDKKIS  60
APQFQVDCQA IQNARKRPIE VDDLSRLVGD TTALNDLYNN KRNKMTNGNS QQQWHQENSM  120
EQQNNKKLHH LPVRRSQKLS DKITALQKLV SPYGKTDTAS VLQEASIYIM LLQEQIQQNL  180
ERMLSSSYKN AAALHPQVHV EVSKWLIHRL LNDNDPMFRD EISYATSRSR EPIDFPIPSP  240
NQNRNSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05170.12e-13bHLH family protein