PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007242.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family LBD
Protein Properties Length: 224aa    MW: 24431.7 Da    PI: 7.8681
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007242.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260941.7e-292102196
       DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                  +C++C+vlr++C++ C+l+ ++     p++q +++ +++k+FG+s +l++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e
  PCP007242.1   2 SCNGCRVLRKGCSDTCILRSCLywidsPEAQGHATLFLAKFFGRSDLLSFVSAVPENQRPALFQSLLFEACGRTVNPVNGAVGLLSSGNWHVCQSAVE 99 
                  6***********************************************************************************************99 PP

       DUF260  94 lal 96 
                  ++l
  PCP007242.1 100 TVL 102
                  876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSCNGCRVLR KGCSDTCILR SCLYWIDSPE AQGHATLFLA KFFGRSDLLS FVSAVPENQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLSSGN WHVCQSAVET VLCGGALRPL QAFTTPTLDE  120
SSDAFSRGAC TPKNRYYPSA SAYYDAERLQ PFEAAGLSLK PNLVAAERGR GRGMWICVSA  180
AMDQRRRDTV SFDSEESVMT TTTTRTFESG GGDLKDRKLL NLFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.17e-65LBD family protein