PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007246.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 360aa    MW: 40221.4 Da    PI: 5.1727
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007246.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-102853251055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+riN+++ +L+ l+P+      +K++ +++Le+Av+Y+k Lq
  PCP007246.1 285 RKRRERINERLRTLQHLVPNG-----TKVDISTMLEEAVHYVKFLQ 325
                  9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MESVGVFADG EWESLSRLFT SEEVEFTPHF LSQGNSFPFQ HNEGMGFETR ESFYPNIPGA  60
ETFFHHPSSV SPNSNVDYLS SQESCNYGDH NHGIFTTILN QENCYFSNSC NFPVGNIDVS  120
ESMDVYMNRD GKSFASFVPA FSDIVMHGSE CNKEDSGSDS QPAIVPVPEK ELQLKRVHDA  180
PEKSSNDTSD SNPKKKPRLS KDVEKSKKNN VRSKKGQKGN SDVKFKDEEE RLQSTSSCTS  240
EGDNGSLEIN GGETSDPKAS STLNLNGKTR ANRGSATDPQ SLYARKRRER INERLRTLQH  300
LVPNGTKVDI STMLEEAVHY VKFLQLQIKL LSSDDMWMYA PIAYNGMDIA LDLQKLSPLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-48bHLH family protein