PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007269.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 312aa    MW: 34632.2 Da    PI: 7.4296
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007269.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.7e-0591113123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C++ F ++  L  H++ H
  PCP007269.1  91 FQCHYCSRKFYTSQALGGHQNAH 113
                  89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEAEDEMYHD FLTQMNTPPP PPPYPHHPNP SLSSPSPSLF NNLLSSSSSP RLPLPPTKTP  60
SSHQIPTHPQ PPTTPHARRA SSSTAAANRI FQCHYCSRKF YTSQALGGHQ NAHKRERAAA  120
RRSLLSAGGG GGCSSVPTHS PHHPHHVPAF NVSPPPTQYQ IMPTNVPRQH HDIDDHAQQY  180
SSGPHEYHQL RQSHHQQQPE AAVHDSSSCF LMEMEHIMQQ DNQPPYYWAV DLSSINTTNH  240
HHPHIPAAAS TCSLPQMIDG PTTSELPQPL FSRAPPSSHA HQYYHRHPQD ATAAHPPRDN  300
ATLHSLDLSL RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.11e-09C2H2 family protein