PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007285.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 220aa    MW: 25079.3 Da    PI: 7.0783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007285.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.26.9e-091762653
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
          HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53
                   +E++RR++++  +++L +llP+ +   p++ ls  e   +A++YIks
  PCP007285.1 17 RVVEKNRRNHLKLLYSKLYSLLPNqN---PKEQLSVNEQIDEAINYIKS 62
                 679*********************55...9999**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MNNNQASQSS STKVERRVVE KNRRNHLKLL YSKLYSLLPN QNPKEQLSVN EQIDEAINYI  60
KSKESKLQKA KEKKESLTGT RKRSNATAFV NVESMEPKTL NIESARSTKA PQIQIHETGS  120
TVEVVLTSGL DNHQFIFYEI IRILDEEQAD VVHASFSTLG DTIFHVVRAE MDKSMLDFGA  180
ARITEKLNRF VNGSISDQEL RQDCFWDFKF EPAAIIGDQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-18bHLH family protein