PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007309.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family YABBY
Protein Properties Length: 170aa    MW: 19018.4 Da    PI: 8.0264
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007309.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY129.64.3e-4070135105170
        YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                   de+ p +p ++rP ekrqrvPsaynrfik+eiqrik+ nPdishreafsaaaknWahfP+ihfgl
  PCP007309.1  70 ADEHFPTPPVINRPSEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGL 135
                  6789999888******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MWALHQSAAS EHAWAASAFL KSVSSSWSLF FSSPNNSLNL LEEIPNVPTP NFLVNQTNVN  60
DFAATPRGGA DEHFPTPPVI NRPSEKRQRV PSAYNRFIKD EIQRIKSVNP DISHREAFSA  120
AAKNWAHFPH IHFGLMPDQT VKKTTIRQQV ASPHAEGEDV LMKDGVFLFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.15e-41YABBY family protein