PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007323.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 248aa    MW: 28467.8 Da    PI: 5.6953
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007323.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.47e-20764150
          NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.........k 50
                 +ppGfrFhPtdeelv++yL+kkv++++++l +vik+vd+yk+ePwdL++         +
  PCP007323.1  7 VPPGFRFHPTDEELVDYYLRKKVTSRRIDL-DVIKDVDLYKIEPWDLQEhtlngqcsyS 64
                 69****************************.9***************943344433330 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
METFSHVPPG FRFHPTDEEL VDYYLRKKVT SRRIDLDVIK DVDLYKIEPW DLQEHTLNGQ  60
CSYSILVQLK QEEGWVVCRV FKKKIASMRI KMSENESPCW YDDQVSFMPE LDSPGHNSSS  120
MNMNMVPYHH LPNYPCKKEL DHLPFQVPHE HFFQLPLLGS PKLVQSSSAT AVSSSNSMAP  180
HAYSIDINHT CTFQSSDQDQ NFQGVVYGNS SNDDHQRAVD QLTDWRALDK FVASQLSQDD  240
ASKGNSYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.12e-28NAC family protein