PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007363.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 220aa    MW: 24200.2 Da    PI: 6.5087
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007363.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding422.2e-131153246
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     g ++  E++++v+++   G++ W++Ia++++ gRt++++k+ w++
      PCP007363.1 11 GQFSDAEEQIIVKLHSIVGNR-WSLIAARLP-GRTDNDVKNNWNT 53
                     789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MVPHHPDLKH GQFSDAEEQI IVKLHSIVGN RWSLIAARLP GRTDNDVKNN WNTKLKKKLS  60
GMGIDPVTHK PFSHLMAEIA TTIEPPQAAH LAEAALGFFK DKMLHILTKK RIDFQLQHIN  120
PTPGNSTATA FRLPMSGFQY GHSTFGNEGN GSPWSQSLCA GSTCTAAADQ QGQLDDKLEV  180
EENGEESAGG KELRNGSSNI FNPDSLLWDL PSDYLMNQMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.12e-58MYB family protein