PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007483.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 244aa MW: 27277.1 Da PI: 10.3469

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007483.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.5	5.8e-09	46	121	3	49
HHHHHHHHHHHHHHHHHHHHHHCTSCCC................................TTS-STCHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkas.............................kapskKlsKaeiLekAve 49 ++h+e E+rRR riN + +Lr +lP + + + ++Ka++L ++v+ PCP007483.1 46 KKHSESEKRRRMRINGQYTTLRAILPDLIkvyylidlmefclnvygviwkmsrklsslRILDIQMDKASVLGETVR 121 68*************************9889999999999999999996666666665555555666666666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MQSTQSYYPK QISFPKGQGV FPKNNIYNKN FFKPKSKAEA KVIAAKKHSE SEKRRRMRIN 60 GQYTTLRAIL PDLIKVYYLI DLMEFCLNVY GVIWKMSRKL SSLRILDIQM DKASVLGETV 120 RKVRELKKAL AEVEAACHCG DRRDECVLPG GVDKLSVEQC EGEKGGLVKA TFSCEDRLGL 180 ISDMTRALSC VKGRVVRAEM VTVGGRSKNA LWVQGLGGGN EGVVALKRAL KVVIDRPVLP 240 RNII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38070.1	3e-34	bHLH family protein