PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007532.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family LSD
Protein Properties Length: 116aa    MW: 12653.5 Da    PI: 9.9413
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007532.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD130.46.3e-103552118
      zf-LSD1  1 CggCrtlLsYPrGApsVR 18
                 Cg+C +lL+YP+GA sVR
  PCP007532.1 35 CGSCAVLLMYPYGAASVR 52
                 *****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MDSKVEVDEA PQPELQSTAA QPSAPSAHQV GQVKCGSCAV LLMYPYGAAS VRNTTSARHG  60
PSNRGNHQLL LILLTKLLMR VRQSRNCNQH PKLGSTLPYI AVAWIGEERR AYTRTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21610.15e-07LSD family protein