PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007670.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 454aa MW: 49865 Da PI: 6.4417

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007670.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.7	6.5e-06	344	382	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L PCP007670.1 344 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 382 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MADEFQTPGN WWDSSSRTRF ETGASPPSSS LNSLGSFGWQ PDMVDIKARS SMDSGSVSGT 60 SSMVFHDTHK LQEGSDSASG GDPNLHMMGS GLSSQATDWN QALFRGEKAE TSFRSILQEN 120 MNSSTANFQQ ESDQQLQWRE KLFAGGCGDS SNEFKQMNRG FSLDQTQFSP QYSSGESTVT 180 CQGLPSSFQM DSASAALYGS PSTILQGILG PHHDNQPQQP NSATINFPYQ GNYGINNSSE 240 LLPSWSKVPQ FLRTSPPKQP PHSHLQFSNN APFWNAPHEA AMKDVRPSFF PSLQPQFPAA 300 RFDEKPKNIS EVQESGAVGK KSGSEVVSKR PRNETSSALP AFKVRKEKMG DRITALQQLV 360 SPFGKTDTAS VLSEAIEYIK FLHEQVNVLS TPYMKSGTAI QHQQQMSDKS KDPDGPKQDL 420 RSRGLCLVPV SSTFPVTHET TVDFWTPTFG GTYR

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MADEFQTPGN WWDSSSRTRF ETGASPPSSS LNSLGSFGWQ PDMVDIKARS SMDSGSVSGT  60
SSMVFHDTHK LQEGSDSASG GDPNLHMMGS GLSSQATDWN QALFRGEKAE TSFRSILQEN  120
MNSSTANFQQ ESDQQLQWRE KLFAGGCGDS SNEFKQMNRG FSLDQTQFSP QYSSGESTVT  180
CQGLPSSFQM DSASAALYGS PSTILQGILG PHHDNQPQQP NSATINFPYQ GNYGINNSSE  240
LLPSWSKVPQ FLRTSPPKQP PHSHLQFSNN APFWNAPHEA AMKDVRPSFF PSLQPQFPAA  300
RFDEKPKNIS EVQESGAVGK KSGSEVVSKR PRNETSSALP AFKVRKEKMG DRITALQQLV  360
SPFGKTDTAS VLSEAIEYIK FLHEQVNVLS TPYMKSGTAI QHQQQMSDKS KDPDGPKQDL  420
RSRGLCLVPV SSTFPVTHET TVDFWTPTFG GTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	9e-84	bHLH family protein