PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007710.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 134aa    MW: 15125.6 Da    PI: 4.2825
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007710.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00022225123
                 EEETTTT.EEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCg.ksFsrksnLkrHirtH 23
                 y+C+ C+ ksFs   +Lk+H++ +
  PCP007710.1  2 YSCNRCNkKSFSVVADLKSHLKHC 25
                 99*******************977 PP
2zf-C2H215.16.5e-053349521
                 TTTEEESSHHHHHHHHH CS
      zf-C2H2  5 dCgksFsrksnLkrHir 21
                  Cg+sFsrks L  H+ 
  PCP007710.1 33 TCGTSFSRKSKLFGHMA 49
                 6**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MYSCNRCNKK SFSVVADLKS HLKHCGEARW RCTCGTSFSR KSKLFGHMAL FEGHMPAVED  60
EKSGGGSKVV TAMEQHDDEE EEEEEEEEGM TTSSKGRELN SSSNIYEDIE FSDELLNGFG  120
SIDDYFLEDM LTDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.36e-26C2H2 family protein