PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007739.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 204aa MW: 23449 Da PI: 4.6536

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007739.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	118.7	5.5e-37	8	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 lppGfrF+Ptdeelvv++L++k++ +++ +vi+++++y ++Pw+L+ k+ +e k+wyf+s+r+ +nr+t++gyWk+ g +++++s+ PCP007739.1 8 LPPGFRFDPTDEELVVHFLQRKAALLPFHP-DVIPDLHLYPYDPWELNGKALSEGKQWYFYSRRA--------QNRVTNNGYWKTLGIEEPIFSSsss 96 79***********************999.99**********97777889***985........589**************9666 PP NAM 96 .kgelvglkktLvfykgrap.kgektdWvmheyrl 128 +++vg+k+ L+f+ g+ap +g kt+W+mheyrl PCP007739.1 97 nPTKKVGMKRYLTFFLGEAPnSGIKTNWIMHEYRL 131 55566******997762589*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MGDDQFKLPP GFRFDPTDEE LVVHFLQRKA ALLPFHPDVI PDLHLYPYDP WELNGKALSE 60 GKQWYFYSRR AQNRVTNNGY WKTLGIEEPI FSSSSSNPTK KVGMKRYLTF FLGEAPNSGI 120 KTNWIMHEYR LPSSASDCAS SSTTTSRSSK RRGQSKTEYS GYVLCRVYER DEEDDDDDGT 180 ELSCLDEVFL SLDDLDEISL PNYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	4e-75	NAC family protein