PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007791.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 432aa    MW: 47483.1 Da    PI: 6.9547
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007791.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37.1e-175099255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  PCP007791.1 50 RYRGVRRRP-WGRYAAEIRDPL----SkDRRWLGTFDTAEEAACAYDCAARAMRG 99
                 59*******.**********73....34999**********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MEEAIRRMDE FTHSSEPDPI TKELRKSTTA ATSKRSLRDT ATAASSGAMR YRGVRRRPWG  60
RYAAEIRDPL SKDRRWLGTF DTAEEAACAY DCAARAMRGV KARTNFVYPP SPPTDVVADH  120
PFPPFSYHMH SHPSAKTRNG YGGANYSPSW NSVPFLQYPS PNQNDGYGGA TTAAATSSFN  180
MLFLRNFINP SQSPSPVYNN QFPYKINGSS STCCSSASLV NHPSSGPRHE ANISGSTNFT  240
TGSSSSMATT PTSTTTTLPF MDITSPPPTK PTSNDDQHYS SDFFPTEASD SGFLEEVIDR  300
FFSKPTSKKL SNDVPKWTDD YAHPSSAAQT PSFDGSSTRS VGGYSKDDHR QVNVCYSFQE  360
LLPLPQPQKL EGCSFNELMG HHHQQQQVSH PQAVPFYNDH APLGGGSDHS MGVDNMFQYP  420
EVMGEFAARV QN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.13e-18ERF family protein