PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007826.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 293aa    MW: 32764.3 Da    PI: 6.5145
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007826.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52.1e-12172218455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   h  +Er+RR+++ ++f  L  llP +     kK +Ka++L  A++Y+k+Lq
  PCP007826.1 172 DHVLAERKRRENLSQRFIALSALLPGL-----KKTDKASVLGDAIKYVKHLQ 218
                  58899**********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MEDPTFINQY EMSSLDYSLD ELNFQSFSSE SYSSYPNFTP KADNFSKASI ENLHQMSGTH  60
DRPAKQPKNN TSSWNSCSTD HIITANASSS SSSHLISFEN SNSSPPTTSQ QYYGLDCRVI  120
KPKNEVEYSN GKLNPPALIS QGIYDPQSCS PKHGQGIKRD ATVTRSPLDA QDHVLAERKR  180
RENLSQRFIA LSALLPGLKK TDKASVLGDA IKYVKHLQEL TKMLEKQAAK KTVEAVVFVK  240
RTQYSADDDI SSSDENSESC SNQPLPEIEA RVSDKEVLIR IHSEKTKDVW QAY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177182ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.16e-35bHLH family protein