PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007866.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 311aa    MW: 33782.2 Da    PI: 6.9962
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007866.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.43.3e-334094155
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 kprlrWt +LHerFv+av+qLGGs kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  PCP007866.1 40 KPRLRWTADLHERFVDAVTQLGGSSKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 94
                 79****************************************************8 PP
2Myb_DNA-binding66.45e-214293148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT++++e++vdav+qlGg    t+k+I+rtm+ kg+tl ++ks++qky+
      PCP007866.1 42 RLRWTADLHERFVDAVTQLGGSskaTPKAIMRTMNvKGLTLFHLKSHLQKYR 93
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MFPGLMHEGG GMVGGEDMQM QGHSHRGGGD PCLVLTSDPK PRLRWTADLH ERFVDAVTQL  60
GGSSKATPKA IMRTMNVKGL TLFHLKSHLQ KYRLGKQSGK DMTDISKDAS YLLESPGTGN  120
SSPNLPTSDL NEGYEVKEAL RAQMEVQSKL HVQVEAEKHL QIRQDAERRY MAMLERACKM  180
LADQFIGGSV TDTDSHKCHG SGNKNPKGSS IDMLGFYTLQ TTDVVGVHGP DEELPISIHT  240
QRADCSTESC LTSHESPGGL TLEGSPGGGK KRMLSLDTGN GSLVWGEAKV RTQEINIAPI  300
DPPRGIVRYG M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.19e-68G2-like family protein