PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP007928.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 245aa    MW: 26641.4 Da    PI: 7.5065
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP007928.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.9e-1989138255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++  g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  PCP007928.1  89 HYRGVRRRP-GGKWAAEIRDPV----KaARVWLGTFDTAEAAALAYDKAALNFKG 138
                  69*******.9*********64....55***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGRGRLLSVE SEEKEEDQII PVYSTRSQQD TSAMVSALAQ VIGKNSVQIN NPLDQVQGLN  60
PLITSQSSPT ETQSQPVLLQ DQGNLRRQHY RGVRRRPGGK WAAEIRDPVK AARVWLGTFD  120
TAEAAALAYD KAALNFKGSK ANLNFPERVQ GSSESGCLTL ITTDQHDSLN INPPQPNITP  180
SSSVFDCTQY NNVTSSASLL SSSSMPSQQA AELPSFSMQF GSSFSSSSSG PPQKYRKDFD  240
SSHSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-39ERF family protein