PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008027.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 189aa MW: 20380.8 Da PI: 10.4397

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008027.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.6	5.4e-39	71	155	2	86
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqq++p+i ++tgt++++as+ a+ s+s+++ s PCP008027.1 71 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSILAATGTGTIPASALaAAGGSVSQQG-TS 155 789******************************************************************99854444444433.22 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MDPKGSKQTQ DIPSFLSLPP QPQSQPQQQQ QQPQQPPQPN NNNMSDNKPA EIKDFQIVIA 60 DKDESGKKQL APKRSSNKDR HTKVEGRGRR IRMPALCAAR IFQLTRELGH KSDGETIQWL 120 LQQSEPSILA ATGTGTIPAS ALAAAGGSVS QQGTSLSAGL HQKIDELGGS SGGRTVIIWS 180 SISHHKSGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	4e-49	TCP family protein