PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008210.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 186aa    MW: 20686 Da    PI: 7.1126
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008210.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-183181155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 + y+GVr +k +g+Wv+eIr+p++   + r++lg+f  +e+Aaka++ a+ +l+g
  PCP008210.1 31 PVYRGVRKRK-WGKWVSEIREPRK---KSRIWLGSFPVPEMAAKAYDVAAYCLKG 81
                 68*****999.**********843...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEQPPYIEDD PSTTTINTKK ANSQGGGTRH PVYRGVRKRK WGKWVSEIRE PRKKSRIWLG  60
SFPVPEMAAK AYDVAAYCLK GRKAQLNFPE DVDHLPRPST RTARDIQAAA AQAAHRVMKS  120
SHITKKNDDD DDHHGGLDGG DDFWGEIELP ELMNNSGCYW NSCGWNTTAF SGDAAAVAWP  180
EGEACL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.14e-52ERF family protein