PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008263.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YA
Protein Properties Length: 209aa    MW: 23101.4 Da    PI: 8.8823
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008263.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.93e-32114170158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep++VNaKQy++Il+RRq+Rak+e+e+k   k+rkpylheSRh+hAlrR+Rg+gGrF
  PCP008263.1 114 EEPVFVNAKQYHGILRRRQSRAKAESENKA-LKNRKPYLHESRHQHALRRARGCGGRF 170
                  69***************************9.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MTSSVRHHSD NSDSDDQQSH SESQVHSSLP AIGMSHPGVP TTNMQYAVPP QVGTGHAVAP  60
GAYPYPDPYY RSIFAPYETQ PYPSQPYGAA QPTVHLQLMG IQQAGVPLPS DAVEEPVFVN  120
AKQYHGILRR RQSRAKAESE NKALKNRKPY LHESRHQHAL RRARGCGGRF LNAKKNENEQ  180
DEMTSGNKSQ SNINLNSDKN ELASSDRTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-56NF-YA family protein