PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008283.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 111aa    MW: 13155.2 Da    PI: 10.446
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008283.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.11e-18350148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed++l ++v+++G g W+ ++r+ g++R++k+c+ rw++yl
      PCP008283.1  3 KGAWTQQEDDILRQYVEKHGDGKWHQVPRETGLNRCRKSCRQRWLNYL 50
                     79*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MRKGAWTQQE DDILRQYVEK HGDGKWHQVP RETGLNRCRK SCRQRWLNYL KPNLKSGDFT  60
EDEIDLIHRL QKLLGNRQVP LFDCIKTKVL HKKLGKEQKP AKAHQPVNKI C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.13e-34MYB family protein