PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008358.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 184aa    MW: 20277.5 Da    PI: 10.5614
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008358.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.62.3e-214898155
          AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++++GVr ++ +gr++AeIrd ++    ++r +lg+++taeeAa+a+++a+++l+g
  PCP008358.1 48 PHFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTYDTAEEAARAYDEAALSLRG 98
                 689*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MSTVDALHLR DTALSLAVEP PSPPPPPRKL RAQPRHASPG KGGGGRDPHF RGVRKRPWGR  60
FAAEIRDPWK KTRKWLGTYD TAEEAARAYD EAALSLRGSK AKTNFGNLAL APPHSLLLGG  120
GSEMLWPPPL MYVMTGAPAV GPVRSEYTGY MLENVDVVVG EEEKKMRKKK KPFLFDLNLP  180
APLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.19e-19ERF family protein