PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008595.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ARR-B

Protein Properties

Length: 636aa MW: 71237.2 Da PI: 6.5118

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008595.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76	5.1e-24	199	252	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl PCP008595.1 199 KARVVWSVDLHQKFVKAVHQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252 68*****************.9*****************************8 PP
2	Myb_DNA-binding	39.3	1.4e-12	201	251	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ PCP008595.1 201 RVVWSVDLHQKFVKAVHQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 251 678***********************************************7 PP
3	Response_reg	80.7	4.8e-27	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+k y ev+++ ++eal ll+ek+ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga PCP008595.1 19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLAREALCLLREKKngYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 113 89*******************.***********999999******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ PCP008595.1 114 DYLLKPIRMKELRN 127 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MDSSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR EALCLLREKK 60 NGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVFRKKIHEI KDIESHESVE GIQLIRSGSD QYDEGYFLGA DDLTSSRKRK 180 DVDNKYDDKD FADCSSAKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR 240 ENVASHLQKY RLYLGRLQKE NDLKSSFGGM KHSDSPSKDA QGSFGLQNSI SIQQNDFAHG 300 SFRVSGNNLV AQCVDPKSHE GDAKGIVSEP VAEIKKGSNG NIPDSQKTRS LQMVDFNNSC 360 VEPKNGVIGN VPDTQKIRSS PLDFNNSYAE TKKVLNGNIP DSQKIRTPQV RPSHSFTSVE 420 SEVNFTEFES TIRTKYSWNE IQLKKEQKPL IQLNSGFNKP PLPGPHSHFQ VDRLQSIPSI 480 SPRPSIAEGD VTGPAKSKPS YSEYINNQGS HVSPTRSTAD SFPDQIKSCV VNHQLSETIS 540 TSTSNMKNQG FNLSSITDLE SAQRNLIVGS ASPFASLDDD FQICWFQGDC YGMNLGLQNI 600 EFPEYNDPAL ISEVPHLYDA LRFDYPCDVT HQNILS

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MDSSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR EALCLLREKK  60
NGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKKIHEI KDIESHESVE GIQLIRSGSD QYDEGYFLGA DDLTSSRKRK  180
DVDNKYDDKD FADCSSAKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR  240
ENVASHLQKY RLYLGRLQKE NDLKSSFGGM KHSDSPSKDA QGSFGLQNSI SIQQNDFAHG  300
SFRVSGNNLV AQCVDPKSHE GDAKGIVSEP VAEIKKGSNG NIPDSQKTRS LQMVDFNNSC  360
VEPKNGVIGN VPDTQKIRSS PLDFNNSYAE TKKVLNGNIP DSQKIRTPQV RPSHSFTSVE  420
SEVNFTEFES TIRTKYSWNE IQLKKEQKPL IQLNSGFNKP PLPGPHSHFQ VDRLQSIPSI  480
SPRPSIAEGD VTGPAKSKPS YSEYINNQGS HVSPTRSTAD SFPDQIKSCV VNHQLSETIS  540
TSTSNMKNQG FNLSSITDLE SAQRNLIVGS ASPFASLDDD FQICWFQGDC YGMNLGLQNI  600
EFPEYNDPAL ISEVPHLYDA LRFDYPCDVT HQNILS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-129	ARR-B family protein