PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008676.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 292aa    MW: 32932.3 Da    PI: 5.8489
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008676.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.3e-08172216655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++ r RR++i ++ +eL +l+P        K++ ae+L+ A +Y+k+Lq
  PCP008676.1 172 SIAARERRRKITEKTQELGKLVPGG-----SKMNTAEMLTAAYNYVKYLQ 216
                  67889******************95.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MTITNCFQQN LEAELLTADF LQYYYYSEYN INSNFSNSFV DEYHSWYDPY DLLNLENHDH  60
DTTTDDHLLL PHNSFSLTAP DFNPHPNPKR QKCFQDCFFP DFTLSNGFVP NLCPLPSLVP  120
VPKFFATPLP KFDQLPEGLT NSTGANIDPG HESITNAANK KKVGEKCVSA QSIAARERRR  180
KITEKTQELG KLVPGGSKMN TAEMLTAAYN YVKYLQAQVG ILQLMGSLKE LKEAPPIEEL  240
QVVASPVLQE KLYLENNCLV PKKFVAILAK HFDAQSKPSF SNNLNQLLTS TT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160181KKKVGEKCVSAQSIAARERRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-26bHLH family protein