PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008686.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 257aa    MW: 29808.9 Da    PI: 7.903
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008686.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM545.7e-171042273128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyat.gkrknr.atksgyWkatgkdkevlskk 96 
                   G+ F+P d  l++++L++k+ ++ l +  +++e+d+y  +P++L +  ++ a  +  yfF++++ ++++ ++ +    +++g W   gk+ +vl+ +
  PCP008686.1 104 LGYTFNPDDGILLHHHLREKCLENALGFYAILEEADVYAKHPQNLIEnyRALAAGNVRYFFTRSRPNETQpDTSTGTdHVQAGHWI-FGKELDVLH-Q 199
                  69**************************999**************7423444466778***998877765333333346789***8.8999****9.9 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  ge+vg+k+ L +       g kt+  + eyrl
  PCP008686.1 200 GEKVGVKQLLEYC----AAGAKTRYKIIEYRL 227
                  99**********9....67889********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MVKRKTSTNN TSTVRVRVES DKDEEILGTD KLELRKLKRI REQEESLKIS YRRAEELERQ  60
ELERLARVSS SFAACRLEIQ AAEIFRKQVE ALKKRELEKR LISLGYTFNP DDGILLHHHL  120
REKCLENALG FYAILEEADV YAKHPQNLIE NYRALAAGNV RYFFTRSRPN ETQPDTSTGT  180
DHVQAGHWIF GKELDVLHQG EKVGVKQLLE YCAAGAKTRY KIIEYRLDPC PDNLKDGPWF  240
LCKLYNDGSY MEVQSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.18e-12NAC family protein