PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008833.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 388aa MW: 43476 Da PI: 4.9274

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008833.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.5	1.3e-09	282	322	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ +L+ l+P+ +K++ +++Le++v+Y+k Lq PCP008833.1 282 RKRRERINERLRTLQHLVPNG-----TKVDISTMLEEVVHYVKFLQ 322 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MESDGVFADG EWESLSRLFS SEEVEFTPHF LSQGNSFPFQ HNEGMGFETL ETFYPNIPGV 60 ETFSHLPSSD SPNSNVYPSS QESCNYGDNH HGNFTAMLNQ ENCYFRNSCN FLVSNIDVSE 120 SMDVYMNHDD KSFASFVPAF SNIVMHGSEC NKEDSSSDSQ PAVVSVPEKE LQLKRVHDAP 180 GKSNNDASKC KKKPRISKDV EKSKKNNVRS KKGQKGNSDV KVKDKEEGLE STSSCTSEDD 240 NGSLEIDGAE TSDPKSSSAL NLNGKTRTNR GSATDPQSLY ARKRRERINE RLRTLQHLVP 300 NGTKVDISTM LEEVVHYVKF LQLQIKLLSS DDMWMYAPIA YNGMDIGLDL QKLLHFYDTT 360 AAGSCYSDDG DPKTYVKVQF IGIWQMEF

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MESDGVFADG EWESLSRLFS SEEVEFTPHF LSQGNSFPFQ HNEGMGFETL ETFYPNIPGV  60
ETFSHLPSSD SPNSNVYPSS QESCNYGDNH HGNFTAMLNQ ENCYFRNSCN FLVSNIDVSE  120
SMDVYMNHDD KSFASFVPAF SNIVMHGSEC NKEDSSSDSQ PAVVSVPEKE LQLKRVHDAP  180
GKSNNDASKC KKKPRISKDV EKSKKNNVRS KKGQKGNSDV KVKDKEEGLE STSSCTSEDD  240
NGSLEIDGAE TSDPKSSSAL NLNGKTRTNR GSATDPQSLY ARKRRERINE RLRTLQHLVP  300
NGTKVDISTM LEEVVHYVKF LQLQIKLLSS DDMWMYAPIA YNGMDIGLDL QKLLHFYDTT  360
AAGSCYSDDG DPKTYVKVQF IGIWQMEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33880.1	4e-48	bHLH family protein