PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008858.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 286aa    MW: 32029.1 Da    PI: 4.7719
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008858.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.4e-133170344
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     +++ eE+   +++ +q+G++ W++Ia +++ gRt++++k++w
      PCP008858.1 31 KFSVEEERVVIELQAQFGNK-WARIATYLP-GRTDNDVKNFW 70
                     799*****************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MESRGRRSAV KTCEEVWPKR LELHSIQGGC KFSVEEERVV IELQAQFGNK WARIATYLPG  60
RTDNDVKNFW SSRQKRLARI LQTSAAAPAT PSSKSHKTKR EVSVFHELPT TMEATKFNCS  120
SEGEPSSQPQ PCLSPPPYFR NSEIIKMVPL PDIVKPKSLC FETNPVQHEL PITDKDPWTD  180
SNTAIPFLQN PQTQTDQIFS SETQEFLARF DPYFDVLGPL DALGLGNGGE PLVMEPPLFE  240
PVGSCLSCEG ERIDHTMTPD CVFDDFPTDM FDQIDPLPNT SGSGQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.18e-44MYB family protein