PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008921.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 430aa MW: 47236 Da PI: 5.535

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008921.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.7	5.7e-10	240	287	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PCP008921.1 240 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 287 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MNRALPEMLN CMNAPGTFIA GNCTDMTVLE RQRARMKWQQ SDHHDQQQQQ IQYNFGGGEL 60 SGVFSLPIHA QGLQGFLSGN RAVKPDPSSE NGWAELGFGS CGLVMNNNGT AGFEGMGNAL 120 NNNISRTFSC PPTVATEKTS GDTVLSQKLS LPAGKESFKK RKADKVQINK AAAAAESEST 180 EKRIKSCAEK GDSKITEQTS TKNNDGESSG DTSKDNSKAS EVQKPDYIHV RARRGQATDS 240 HSLAERVRRE KISERMKYLQ DLVPGCNKIT GKAGMLDEII NYVQSLQRQV EFLSMKLAAV 300 NPRLDFNIDD LFAKEMFPTC AANFPTMGMS SEMTNSVYLQ LNPMQQLVSS SGLDMGLDST 360 DLALRRTISA PSSIPEPFLD TSCFTQPQPT AIWDADLQNI FDVEFQQGRS SFQSQPFTGS 420 IEDSNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MNRALPEMLN CMNAPGTFIA GNCTDMTVLE RQRARMKWQQ SDHHDQQQQQ IQYNFGGGEL  60
SGVFSLPIHA QGLQGFLSGN RAVKPDPSSE NGWAELGFGS CGLVMNNNGT AGFEGMGNAL  120
NNNISRTFSC PPTVATEKTS GDTVLSQKLS LPAGKESFKK RKADKVQINK AAAAAESEST  180
EKRIKSCAEK GDSKITEQTS TKNNDGESSG DTSKDNSKAS EVQKPDYIHV RARRGQATDS  240
HSLAERVRRE KISERMKYLQ DLVPGCNKIT GKAGMLDEII NYVQSLQRQV EFLSMKLAAV  300
NPRLDFNIDD LFAKEMFPTC AANFPTMGMS SEMTNSVYLQ LNPMQQLVSS SGLDMGLDST  360
DLALRRTISA PSSIPEPFLD TSCFTQPQPT AIWDADLQNI FDVEFQQGRS SFQSQPFTGS  420
IEDSNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	2e-70	bHLH family protein