PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009299.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 236aa    MW: 26313.3 Da    PI: 4.7766
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009299.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-1861112155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr++  +++Wv+e r+p   + k+ r++lg++ tae+Aa+a++ a+++++g
  PCP009299.1  61 PVYRGVRRRN-NNKWVCEMREP---NkKKSRIWLGTYPTAEMAARAHDVAALAFRG 112
                  68*****887.8******9998...5477************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MNTIFSTQLS DSSEKPESSS DDTSITAQSQ LASFSDEEVI LASSRPKKRA GRRVFKETRH  60
PVYRGVRRRN NNKWVCEMRE PNKKKSRIWL GTYPTAEMAA RAHDVAALAF RGKLACLNFA  120
DSAWRLPVPA SIDSVDIRRA AAEAAETFRP AEFGGVLESG DDEKESKKME EEKGCGGVEE  180
SGILFYLDEE EMFDMPRLLD SMAEGLLLSP PHSSGGYMNW DDVASNDDVS LWSFSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-59ERF family protein