PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009710.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 341aa    MW: 37836.7 Da    PI: 4.4182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009710.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-19122171154
          AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                  s y+GVr++k +g+W+AeIrd +     + +r++lg+f tae+A ka++a r+++e
  PCP009710.1 122 SPYRGVRQRK-WGKWAAEIRDpF-----KgARIWLGTFNTAEDASKAYEAKRLEIE 171
                  68*******9.**********55.....45***********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MPEPQRQLVN QRNSMRKSKR ELFPAQQSKI TRKVRIICYD PDATDDSSSS EDEGGRKRSF  60
AKNPRRFVRE ITFCQPNVAL PPPKAAAEPE SSGQDSNYGG VKTLKPSNKK VKFTKSHRQS  120
SSPYRGVRQR KWGKWAAEIR DPFKGARIWL GTFNTAEDAS KAYEAKRLEI EEMVAAAPTA  180
VSASDKSNNT SASAVVSNNC SYNNAEPSED SDCVLSQRSP SSVLDLETSA SNNIQNGADL  240
EKEIADDSTN LGELQIPDLG FLDDSLGPLH FDQDITLGPE LDSLYLEDFG QYFDDYSSIE  300
DIQIPGFESD EPSSLPDCDF EDLGKDDIAC WLDEPLNIVC Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.15e-35ERF family protein