PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP009747.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 415aa MW: 45075.7 Da PI: 6.7636

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP009747.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.5	1.6e-05	161	187	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 hn+ Er RR++i+ + L+e++P++ PCP009747.1 161 LHNMSERMRRNKIRGKQKVLQEIIPNC 187 5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MCLYDLGLLL ILPIGLMVEP QFHHTYEDEY SQGFPYENFG VLPIDSVVLD PPTDNAHWNN 60 TGSSISATAA AGGGDDHKHF QEIFQNLSNI QLDPLLQMQQ PTPNIFSHDK EVMLCGLSLE 120 KGEFSGKTTT SHEMETKPVM LSGEFKPSKD ERPKRRRATE LHNMSERMRR NKIRGKQKVL 180 QEIIPNCNKM MSMGGGAVYQ TPNLSFAGIQ GTQMSQFKPY LPMGPGLGTS NAYEIGMGLG 240 MTMGMTNMCY TIGLPTMSVH SATAALPLMS GPGVLPVNPQ VQMQIPFLAS QVMPSTTAAT 300 SNMVQPRFAT NFSRIFNYAN QAGESSSPNT ASDNEKVPFI NQVGEAAVTC NPMELAPCAA 360 AIMSSNSPTA VCCGKLKEQS PCLCQYVKNP NLQKLVNSPN AKKVADTCGS PFPTC

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MCLYDLGLLL ILPIGLMVEP QFHHTYEDEY SQGFPYENFG VLPIDSVVLD PPTDNAHWNN  60
TGSSISATAA AGGGDDHKHF QEIFQNLSNI QLDPLLQMQQ PTPNIFSHDK EVMLCGLSLE  120
KGEFSGKTTT SHEMETKPVM LSGEFKPSKD ERPKRRRATE LHNMSERMRR NKIRGKQKVL  180
QEIIPNCNKM MSMGGGAVYQ TPNLSFAGIQ GTQMSQFKPY LPMGPGLGTS NAYEIGMGLG  240
MTMGMTNMCY TIGLPTMSVH SATAALPLMS GPGVLPVNPQ VQMQIPFLAS QVMPSTTAAT  300
SNMVQPRFAT NFSRIFNYAN QAGESSSPNT ASDNEKVPFI NQVGEAAVTC NPMELAPCAA  360
AIMSSNSPTA VCCGKLKEQS PCLCQYVKNP NLQKLVNSPN AKKVADTCGS PFPTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28815.1	1e-09	bHLH family protein