PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009815.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 190aa    MW: 20873.5 Da    PI: 9.4827
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009815.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-1961111255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrd       + +r +lg+f taeeAa a+++a+ +++g
  PCP009815.1  61 HYRGVRRRP-WGKYAAEIRD----SarQGARMWLGTFNTAEEAALAYDRAAFRMRG 111
                  8********.**********....33334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MALHFSQQNE LPLNENDSQD IVIYQVLNEP MSLIPSLLPQ RYPINRQPNR LEPTKNIGKK  60
HYRGVRRRPW GKYAAEIRDS ARQGARMWLG TFNTAEEAAL AYDRAAFRMR GSKAMLNFPA  120
EIGAASSSPT SSVHKVGPSF GVTCSLNSKN STTTSDSSGS CSTLSIGTPR SESETELSAV  180
EVPNMQGQII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.13e-31ERF family protein