PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009837.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 178aa    MW: 18800.2 Da    PI: 10.2726
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009837.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.1e-201464256
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a++ l+g+
  PCP009837.1 14 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARTLRGA 64
                 69*******.**********883....5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MATAAAPSSS REGHYRGVRK RPWGRYAAEI RDPWKKTRVW LGTFDTPEEA ALAYDGAART  60
LRGAKAKTNF PAPIPSGISL DLNAPSAAHW ATHSGRLVEF LHTGVLNDMG SGTSTNDTLP  120
LMARREPQQT PVGVAGNVGG GGNATVAEGS GFGSTASFLG LVRRGLPIDL NEPPPLWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-47ERF family protein