PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009969.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 190aa    MW: 21224.5 Da    PI: 6.7943
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009969.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-183080155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aaka++ a+ +l+g
  PCP009969.1 30 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFPVPEMAAKAYDVAAYCLKG 80
                 68*****887.**********843...6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MEKPPYTEDD PSTTTTLPKA DSQGGGSRHP VYRGVRKRRW GKWVSEIREP RKKSRIWLGS  60
FPVPEMAAKA YDVAAYCLKG RKAQLNFPEE VDHLPRPSTS TARDIQAAAT QAAHTIMKSS  120
HITRKSDEDD NDHHHHGGMD GGDDFWGEIE LPELMDNSGC YWNSCGWNMT SFSGEAAAAA  180
HGQRERLVSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.15e-52ERF family protein