PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009996.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 209aa    MW: 23108.1 Da    PI: 8.6598
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009996.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000263252323
                 ETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                 C  C+++F +   L +Hi +H
  PCP009996.1 32 CRLCDRVFMSTQALISHIDSH 52
                 ******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MSRYNWNLRQ GNMLGSSDPA PPRATDLTQI ACRLCDRVFM STQALISHID SHMGDGDRTT  60
ARLRQLNNIP NNINAFISSN APTRPAPIFP LTNPFHQRSL FHGANNQIGF ATPPLPPPQP  120
HDQLPCAQQP QAPHYSLPRN PNVNSGAAAS HHMMKPYGNQ MAHVVREENY SDCTRPFLSQ  180
LERLIPSINF GLDASGNAKS DNLDLALKL