PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010087.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 565aa MW: 63593.4 Da PI: 9.5947

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010087.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29	2.5e-09	10	54	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT+ +++ +a +++ ++ +W ++ar +g g++++++k ++ PCP010087.1 10 SWTPKQNKQFEKALALYDKDtpdRWQKVARAVG-GKSAEEVKRHYE 54 7******************************.********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MMASNSLSSS WTPKQNKQFE KALALYDKDT PDRWQKVARA VGGKSAEEVK RHYELLIEDV 60 KHIESGRERS KNMAEEQLNI LQQEAQAKAQ MLRMEDEHAR NRMKIDHEKQ RQNNAEMLRM 120 QEESNIRKER ARLATEAQKQ EQQRQTEREK HELELKNIEA EAIANAKGRA HEAKLNAELN 180 RNMLLDQMNG EKEKWLAAIN TTFSHIEGGI RTLLTDRNKL VMTVGGATAV AAGVYTTREG 240 SRVIWGYVNR LLGQPSLIRE SSIARFPGSE MLSLAKNKVL NYSTGSSQGK NGLANIILHP 300 SLQSRIEHLA RATANTKAHQ APFRNMMFYG PPGTGKTMVA REIARKSGLD YAMMTGGDVA 360 PLGAQAVTKI HQIFDWAKNS KKGLLLFIDE ADAFLCERNS THMSEAQRSA LNALLFRTGD 420 QSRDIVLVLA TNRPGDLDSA ITDRMDEVIE FPLPGEEERF KLLKLYLNKY LGDEGKSSKS 480 GIFLRKKPQK IVIKDVSDDL IREAARKTEG FSGREIAKLM ASVQAAVYGR EDCVLDSQLF 540 EEIVDYKVTE HHQRMKLAAE GGHPA

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MMASNSLSSS WTPKQNKQFE KALALYDKDT PDRWQKVARA VGGKSAEEVK RHYELLIEDV  60
KHIESGRERS KNMAEEQLNI LQQEAQAKAQ MLRMEDEHAR NRMKIDHEKQ RQNNAEMLRM  120
QEESNIRKER ARLATEAQKQ EQQRQTEREK HELELKNIEA EAIANAKGRA HEAKLNAELN  180
RNMLLDQMNG EKEKWLAAIN TTFSHIEGGI RTLLTDRNKL VMTVGGATAV AAGVYTTREG  240
SRVIWGYVNR LLGQPSLIRE SSIARFPGSE MLSLAKNKVL NYSTGSSQGK NGLANIILHP  300
SLQSRIEHLA RATANTKAHQ APFRNMMFYG PPGTGKTMVA REIARKSGLD YAMMTGGDVA  360
PLGAQAVTKI HQIFDWAKNS KKGLLLFIDE ADAFLCERNS THMSEAQRSA LNALLFRTGD  420
QSRDIVLVLA TNRPGDLDSA ITDRMDEVIE FPLPGEEERF KLLKLYLNKY LGDEGKSSKS  480
GIFLRKKPQK IVIKDVSDDL IREAARKTEG FSGREIAKLM ASVQAAVYGR EDCVLDSQLF  540
EEIVDYKVTE HHQRMKLAAE GGHPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75250.2	3e-27	MYB_related family protein