PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010108.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 217aa    MW: 24309.2 Da    PI: 7.5092
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010108.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-18655255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 +++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  PCP010108.1  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAILMNG 55
                 89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVQTRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMNGQNAKT  60
NFPISNNNSD QETKPATDQN TPWSPKALSE LLSAKLRKCC KDPSPSLTCL RLDNDNSDIG  120
VWQKRPAGSR ASSNWVMRIE LGKKKKQSSD HDHQEESLSS LTSSSSSSSM VGLIEGGMSE  180
ADQDEEDKLA MQMIEELLNW NYPMPSATSN VHEGNNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.12e-67ERF family protein