PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010294.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CAMTA

Protein Properties

Length: 854aa MW: 96100.8 Da PI: 5.7426

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010294.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	183.7	2e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 ++ ++rwl++ ei++iL nf+k++++ e++++p+sgsl L++rk++ryfrkDG++w+kk+dgktv+E+hekLKvg+v+vl+cyYah+e++++fqrrcy PCP010294.1 20 VEAQHRWLRPAEICEILSNFHKFHISPEPPNKPPSGSLYLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHEKLKVGSVDVLHCYYAHGEDDENFQRRCY 117 5669******************************************************************************************** PP CG-1 100 wlLeeelekivlvhylevk 118 wlLe++l +iv+vhyl+vk PCP010294.1 118 WLLEQDLMHIVFVHYLQVK 136 **************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 854 aa Download sequence
MAERGSDAQG PRLDFQQLLV EAQHRWLRPA EICEILSNFH KFHISPEPPN KPPSGSLYLF 60 DRKVLRYFRK DGHNWRKKRD GKTVKEAHEK LKVGSVDVLH CYYAHGEDDE NFQRRCYWLL 120 EQDLMHIVFV HYLQVKLPLG DNSLQLPECS LDQSMNLQRT LEANLRNTPD LVSAHLNQQN 180 EQLVQDDLQA QLTNAESECL IISSSEHDVS KDGNVNYAFT LRQQLLDREE GLKKVDSFSR 240 WVSKELEEVD DLQMQSSSGI PWSTAECGDV VDDSSLSPSI SQDQLFSIVD FSPKWAYTDS 300 EIEVLVFGTF LVSQKEVTKY SWSCMFGEVE VPAQVLASGV LFCFAPPHSA GQVPFYVTCS 360 NRLACSEVRE FKYQVGSTKG LDMTDIGDGA ALEMHLHLRL ESLLSLRPLS PSGQLFGGVK 420 ENRSLISKII SLQEEEDYLH AAEPAAVNYL LQNEGMEHLI KLMKEKLYTW LLYKAIEDGK 480 GPSVLDAEGQ GVLHLAAALG YDWAIKPTVT AGVSINFRDV NDPGALTDPS PEVPLGRTPA 540 DLASVSSHKG ISGFLAESSL TTYLKSLTMN DAKEDGAAEI SGTKVVKTFS ERIATPVCYG 600 DIPDALSLKD SLTAITNATQ AADRIQQMFR MQSFERKRLT EFDSDEFGMP DERAISFITS 660 KSHKGPVNGN AHTAAVQIQK KFRGWKKRKE FLIIRQRIVK IQAHVRGHQV RKQYKAITWS 720 VGILEKVILR WRRKGTGLRG FRPDAVAKIP DPQPVASSED DYDFLKKGRK QTEERLQKAL 780 TRVKSMVQYP EGRAQYRRLL NVVEGFRETK VNDMAVEVSE EKAEGGDEKA EGGDDLIDID 840 KLLDDDTFMS IAFD

Sequence ? help Back to Top

Protein Sequence Length: 854 aa Download sequence

MAERGSDAQG PRLDFQQLLV EAQHRWLRPA EICEILSNFH KFHISPEPPN KPPSGSLYLF  60
DRKVLRYFRK DGHNWRKKRD GKTVKEAHEK LKVGSVDVLH CYYAHGEDDE NFQRRCYWLL  120
EQDLMHIVFV HYLQVKLPLG DNSLQLPECS LDQSMNLQRT LEANLRNTPD LVSAHLNQQN  180
EQLVQDDLQA QLTNAESECL IISSSEHDVS KDGNVNYAFT LRQQLLDREE GLKKVDSFSR  240
WVSKELEEVD DLQMQSSSGI PWSTAECGDV VDDSSLSPSI SQDQLFSIVD FSPKWAYTDS  300
EIEVLVFGTF LVSQKEVTKY SWSCMFGEVE VPAQVLASGV LFCFAPPHSA GQVPFYVTCS  360
NRLACSEVRE FKYQVGSTKG LDMTDIGDGA ALEMHLHLRL ESLLSLRPLS PSGQLFGGVK  420
ENRSLISKII SLQEEEDYLH AAEPAAVNYL LQNEGMEHLI KLMKEKLYTW LLYKAIEDGK  480
GPSVLDAEGQ GVLHLAAALG YDWAIKPTVT AGVSINFRDV NDPGALTDPS PEVPLGRTPA  540
DLASVSSHKG ISGFLAESSL TTYLKSLTMN DAKEDGAAEI SGTKVVKTFS ERIATPVCYG  600
DIPDALSLKD SLTAITNATQ AADRIQQMFR MQSFERKRLT EFDSDEFGMP DERAISFITS  660
KSHKGPVNGN AHTAAVQIQK KFRGWKKRKE FLIIRQRIVK IQAHVRGHQV RKQYKAITWS  720
VGILEKVILR WRRKGTGLRG FRPDAVAKIP DPQPVASSED DYDFLKKGRK QTEERLQKAL  780
TRVKSMVQYP EGRAQYRRLL NVVEGFRETK VNDMAVEVSE EKAEGGDEKA EGGDDLIDID  840
KLLDDDTFMS IAFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein