PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010460.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

C2H2

Protein Properties

Length: 212aa MW: 22839.5 Da PI: 10.0576

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010460.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.6e-05	186	208	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg+ F+ ++L++H+ H PCP010460.1 186 ACSQCGEIFPKMESLEHHQAIrH 208 6******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MALFPFAPEA TEPKKKETPP SKRRQKQSSS TNKKQQKPPS SSSSSSWDHI KNLLTCKQIE 60 GSRVHDPSKN NIVGGAAADH GGGYSKLGSS CSSICSFRDV VHGNTRVVHR GDSSSPESST 120 LGQETGLLAR KPATRSIRSN GSGSSAAYQT SSSSRGMQFR KLSGCYECHM IVDPSRYPVP 180 RSTICACSQC GEIFPKMESL EHHQAIRHAG TT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-51	C2H2 family protein