PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010552.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 218aa    MW: 24472.4 Da    PI: 8.4859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010552.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-18655255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                 +++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  PCP010552.1  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAILMNG 55
                 89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVQSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMNGQNAKT  60
NFPILNNNNS DQDTKSPTDQ DTPWSPKALS ELLRAKLRKC CKDQSPSLTC LRLDNDNSHI  120
GVWQKRPSGS RASSNWVMRI ELGKKKKQGS NDDHQEELMS SLSSSSSSSS MVGLTEGGLS  180
EADQDEEDKL AVQMIEELLN WNYPMPPPAG NVQEGKNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.26e-68ERF family protein